I want to run a pipeline on a cluster where the name of the jobs are of the form : smk-{config["simulation"]}-{rule}-{wildcards}. Can I just do : snakemake --profile slurm --configfile myconfig.yaml With slurm/config.yaml being : executor: slurm jobs: 64 latency-wait: 30 cluster: sbatch --partition=workq --job-name=smk-{config["simulation"]}-{rule}-{wildcards} [...] Continue reading...