I am trying to build Graph Tool from source in a RockyLinux8 Docker container. I cannot seem to find an .rpm that fits the specific Python installation I require for other purposes. I am specifically downloading graph-tool-release-2.77 from the developer's repository. My Dockerfile looks like so: FROM docker.io/nvidia/cuda:12.0.1-cudnn8-devel-rockylinux8 AS base # Set root password and create a user within the container RUN echo 'rootass' | chpasswd RUN useradd -m -s /bin/bash contuser && echo "contuserass" | chpasswd # Install python3.8 and make venv RUN dnf install --setopt=sslverify=false -y python38 python38-devel python38-pip RUN python3.8 -m venv /venvs/py38 --system-site-packages RUN . /venvs/py38/bin/activate && \ pip install --upgrade pip wheel setuptools && \ pip install numpy scipy matplotlib # Enable EPEL (CGAL-devel) and PowerTools (boost-python3-devel) packages. RUN dnf install --setopt=sslverify=false -y epel-release dnf-plugins-core RUN dnf config-manager --set-enabled powertools # Copy required packages and graphtool source COPY support_files/graph-tool-2.77/ /tmp/graph-tool-2.77/ # Download the packages needed for graph-tool build into RUN dnf install --setopt=sslverify=false -y ncurses libtool automake RUN dnf install --setopt=sslverify=false -y \ python3-devel boost-python3 boost-python3-devel boost-devel expat-devel CGAL-devel # Build graph-tool from source RUN . /venvs/py38/bin/activate && \ cd /tmp/graph-tool/ && \ ./configure PYTHON=/venvs/py38/bin/python3.8 \ --prefix=/venvs/py38 \ --with-python-module-path=/venvs/py38/lib/python3.8/site-packages \ --disable-cairo --disable-sparsehash && \ make -j 16 && make install # Entrypoint COPY docker-entrypoint.sh /docker-entrypoint.sh RUN chmod +x /docker-entrypoint.sh ENTRYPOINT ["/docker-entrypoint.sh"] After the make -j 16 begins I start to see some errors in the format: ../template/base_vec.cc ^ src/graph/inference/uncertain/dynamics/lotka_volterra/base_vec.cc:1:1: error: expected unqualified-id before ‘.’ token ../template/base_vec.cc ^ src/graph/inference/uncertain/dynamics/pseudo_cising/base_vec.cc:1:1: error: expected unqualified-id before ‘.’ token ../template/base_vec.cc ^ The compilation process continues, but when make install is ran I receive a similar error message and the library is not installed in the venv site-packages. Here are the versions of what I assume are the relevant packages used during the build process: $ gcc --version gcc (GCC) 8.5.0 20210514 (Red Hat 8.5.0-22) $ aclocal --version aclocal (GNU automake) 1.16.1 $ autoconf --version autoconf (GNU Autoconf) 2.69 $ make --version GNU Make 4.2.1 Seemingly unrelated, but another issue I found is that the file /graph-tool-2.77/src/graph/inference/blockmodel/graph_blockmodel_emat.hh seemingly has an error on approximately line 125. make says that min_load_factor is no defined. It just seems odd to me that the source I downloaded, that seemingly passes all of the developer's tests, and has some rpms for, has a compilation error like this. I don't see how it's related to my issue, but just odd. For posterity, I simply comment that line (_h.min_load_factor(.25) of the file and compilation "works", albeit with the issues above. Continue reading...